The detailed information of tRNA gene sequence


Sequence ID>WENV170762997
Genome IDLWDU01000868
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2646
End posion on genome 2717
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccgggaga
tRNA gene sequence 
GAGGCTATGGCGCAATGGCAGCGCGTCGGATTCCAGACCCGAAGGTTGGGGGTTCGAATC
CCTCTAGCCTCAttt
Downstream region at tRNA end position 
tcttgcatgg
Secondary structure (Cloverleaf model)
>WENV170762997	Trp	CCA
                   a      Attt tcttgcatgg
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C T C C C     A
        A A        G      | + | | |     G
      T     C G C G       G G G G G     C
      G     | | | |                 T T
      G     G C G C
        C A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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