The detailed information of tRNA gene sequence


Sequence ID>WENV170763020
Genome IDLWDU01000868
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5093
End posion on genome 5166
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
atgcttttag
tRNA gene sequence 
GCTCGAGTGGTCTAGTTGGTTATGACGACTGCCTAACACGCAGTAGGTCCCCGGTTCGAT
CCCGGGCTCGAGTAtct
Downstream region at tRNA end position 
tttgttccgt
Secondary structure (Cloverleaf model)
>WENV170763020	Val	AAC
                   g      Atct tttgttccgt
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T
                     G - C          C T
                    T     G G G C C     A
      T G A        G      | | | | |     G
    T       T C T G       C C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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