The detailed information of tRNA gene sequence


Sequence ID>WENV170763044
Genome IDLWDU01001111
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6671
End posion on genome 6758
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagaatacgc
tRNA gene sequence 
GGATCGGTCGCATAGTGGCCTAGTGCACCGTCTTGGAAAGGCGGCATATCGCAAGATATC
GAGAGTTCGAATCTCTCCCGATCCGCCA
Downstream region at tRNA end position 
ttttaggaac
Secondary structure (Cloverleaf model)
>WENV170763044	Ser	GGA
                   c      GCCA ttttaggaac
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    C       G T G C
      C T A        A     CATATCGCAAGATATC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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