The detailed information of tRNA gene sequence


Sequence ID>WENV170763054
Genome IDLWDU01001148
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2028
End posion on genome 1953
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taagatgcaa
tRNA gene sequence 
GGTCCCTTGGTGAAATTGGTTATCACGCTAGCCTGTCACGCTGGTATTAGGAGTTCAAAT
CTCCTAGGGACCGCCA
Downstream region at tRNA end position 
gtcctcgggg
Secondary structure (Cloverleaf model)
>WENV170763054	Asp	GTC
                   a      GCCA gtcctcgggg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C T C     A
      T A A        G      | | | | |     A
    T       A G T G       A G G A G     C
    G       | | | |                 T T
    G       T C A C
      T T A        G     TATT
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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