The detailed information of tRNA gene sequence


Sequence ID>WENV170763081
Genome IDLWDU01001658
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 569
End posion on genome 480
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCACCCTGCTAAGGTGTTATACGGGTAACTGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcattgaga
Secondary structure (Cloverleaf model)
>WENV170763081	Ser	GCT
                   t      GCCA ttcattgaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATACGGGTAACTGTATC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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