The detailed information of tRNA gene sequence


Sequence ID>WENV170763173
Genome IDLWDU01003499
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2302
End posion on genome 2227
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttaaaagcc
tRNA gene sequence 
GGGGATATAGCTCAGCTGGGAGAGCGCCGGCTTTGCAAGCCGGAGGTCACCGGTTCGATC
CCGGTTATCTCCACTA
Downstream region at tRNA end position 
cggcacggta
Secondary structure (Cloverleaf model)
>WENV170763173	Ala	TGC
                   c      ACTA cggcacggta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C T
                    T     T G G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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