The detailed information of tRNA gene sequence


Sequence ID>WENV170763260
Genome IDLWDU01005427
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1043
End posion on genome 1131
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctgccttC
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTTTAATGCTACAGTCTTGAAAACTGTCGTGGGTTTACGCCCA
CCGTAGGTTCGAATCCTACCGCTTCAGAaa
Downstream region at tRNA end position 
tgcgagcaaa
Secondary structure (Cloverleaf model)
>WENV170763260	Ser	TGA
                   C      GAaa tgcgagcaaa
                     G   A
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T A G G     C
    G         | | |                 T T
    T       A T G C
      T T A        T     CGTGGGTTTACGCCCACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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