The detailed information of tRNA gene sequence


Sequence ID>WENV170763269
Genome IDLWDU01005591
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1481
End posion on genome 1556
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataagctact
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aaagaggaaa
Secondary structure (Cloverleaf model)
>WENV170763269	Trp	CCA
                   t      GCCA aaagaggaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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