The detailed information of tRNA gene sequence


Sequence ID>WENV170763278
Genome IDLWDU01005724
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 840
End posion on genome 929
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctaaaaattt
tRNA gene sequence 
GGAAGGATGGGTGAGAGGCTGAAACCACAAGTTTGCTAAATTTGCATAGCCGTAAGGCTA
TCGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
gttatcaaag
Secondary structure (Cloverleaf model)
>WENV170763278	Ser	GCT
                   t      GCCA gttatcaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATAGCCGTAAGGCTATC
                    C - G
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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