The detailed information of tRNA gene sequence


Sequence ID>WENV170763307
Genome IDLWDU01006544
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3366
End posion on genome 3290
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcctcttgt
tRNA gene sequence 
AGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCCACCA
Downstream region at tRNA end position 
tattatcagt
Secondary structure (Cloverleaf model)
>WENV170763307	Met	CAT
                   t      ACCA tattatcagt
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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