The detailed information of tRNA gene sequence


Sequence ID>WENV170763311
Genome IDLWDU01006738
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2188
End posion on genome 2263
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aagaattaga
tRNA gene sequence 
GCCGGTGTAGCTCAGTTGGTAGAGCAACGCATTCGTAATGCGTAGGTCGGAGGTTCGAAT
CCTCTCGCCGGCACCA
Downstream region at tRNA end position 
ttgacgtagc
Secondary structure (Cloverleaf model)
>WENV170763311	Thr	CGT
                   a      ACCA ttgacgtagc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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