The detailed information of tRNA gene sequence


Sequence ID>WENV170763356
Genome IDLWDU01007597
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2308
End posion on genome 2233
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttttccatT
tRNA gene sequence 
GGGGGCATAGCATAATCTGGTTAGTGTAGCCGGCTCCAGATCGGCTGATCGGGGTTCGAA
TCCCTGTGTCCCCATac
Downstream region at tRNA end position 
acttttttta
Secondary structure (Cloverleaf model)
>WENV170763356	Trp	CCA
                   T      ATac acttttttta
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     G T C C C     A
    C T A A        A      | + | | |     G
  T         T A C G       C G G G G     C
  G         + | | +                 T T
  G         G T G T
    T T A          A     TGAT
                    G - C
                    C - G
                    C - G
                    G - C
                    G + T
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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