The detailed information of tRNA gene sequence


Sequence ID>WENV170763391
Genome IDLWDU01008509
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2269
End posion on genome 2194
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcagaaaaag
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCGGGCTTTGCAAGCCTGAGGTCGTCGGTTCGATC
CCGTCCAGCTCCACCA
Downstream region at tRNA end position 
ggtccaccaa
Secondary structure (Cloverleaf model)
>WENV170763391	Ala	TGC
                   g      ACCA ggtccaccaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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