The detailed information of tRNA gene sequence


Sequence ID>WENV170763392
Genome IDLWDU01008531
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1705
End posion on genome 1795
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atagacgaag
tRNA gene sequence 
GGAGAGGTGGCAGAGTCTGGTTGAATGCTCCGCACTCGAAATGCGGTATACACCTAGTGT
ATCGGGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
atgaaaaaac
Secondary structure (Cloverleaf model)
>WENV170763392	Ser	CGA
                   g      GCAA atgaaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        T     TATACACCTAGTGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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