The detailed information of tRNA gene sequence


Sequence ID>WENV170763425
Genome IDLWDU01009623
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1162
End posion on genome 1237
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atcttctttT
tRNA gene sequence 
GGGGACGTAGGTTAGCTTGGTATACTGCCAGCCTCGGGCGCTGGAGATCATGGGTTCAAC
TCCCACCGTCCCCATtt
Downstream region at tRNA end position 
tcattcaatc
Secondary structure (Cloverleaf model)
>WENV170763425	Pro	CGG
                   T      ATtt tcattcaatc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T C
                    T     C A C C C     A
      C G A        A        | | | |     A
    T       T T G G       A T G G G     C
    T         | | +                 T T
    G       T A C T
      G T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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