The detailed information of tRNA gene sequence


Sequence ID>WENV170763429
Genome IDLWDU01009656
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1926
End posion on genome 2002
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaattctaa
tRNA gene sequence 
GGACCGGTAGTTCAGCTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAA
TCCCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tttttattat
Secondary structure (Cloverleaf model)
>WENV170763429	Asp	GTC
                   a      GCCA tttttattat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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