The detailed information of tRNA gene sequence


Sequence ID>WENV170763454
Genome IDLWDU01010199
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2183
End posion on genome 2271
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcttaccgta
tRNA gene sequence 
GGAGAGGTGGCAGAGCCTGGCTGAATGCGCCGCACTCGAAATGCGGTATACACCTAGTGT
ATCGGGGGTTCGAATCCCTCCCTCTCCGCag
Downstream region at tRNA end position 
atgtttggta
Secondary structure (Cloverleaf model)
>WENV170763454	Ser	CGA
                   a      GCag atgtttggta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATACACCTAGTGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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