The detailed information of tRNA gene sequence


Sequence ID>WENV170763457
Genome IDLWDU01010262
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3900
End posion on genome 3815
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnntttT
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGTtt
Downstream region at tRNA end position 
attacttacc
Secondary structure (Cloverleaf model)
>WENV170763457	Ser	TGA
                   T      GTtt attacttacc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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