The detailed information of tRNA gene sequence


Sequence ID>WENV170763469
Genome IDLWDU01010615
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2815
End posion on genome 2739
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcctcttgt
tRNA gene sequence 
AGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCCACCA
Downstream region at tRNA end position 
agagtagcaa
Secondary structure (Cloverleaf model)
>WENV170763469	Met	CAT
                   t      ACCA agagtagcaa
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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