The detailed information of tRNA gene sequence


Sequence ID>WENV170763493
Genome IDLWDU01011039
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2700
End posion on genome 2776
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaaattT
tRNA gene sequence 
GGATTCGTCGTCTAGCTTGGTTTGGATGCCGCACTCACACTGCGGAGGTCAAGGGTTCAA
ATCCCTTCGGATCCATtt
Downstream region at tRNA end position 
ttagtacata
Secondary structure (Cloverleaf model)
>WENV170763493	Val	CAC
                   T      ATtt ttagtacata
                     G - C
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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