The detailed information of tRNA gene sequence


Sequence ID>WENV170763501
Genome IDLWDU01011196
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1237
End posion on genome 1313
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gctccccttc
tRNA gene sequence 
GGGGGTGTAGCTCAATTGGTTAGAGCGCTGCCCTGTCACGGCAGAGGTTGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
tttttctttc
Secondary structure (Cloverleaf model)
>WENV170763501	Asp	GTC
                   c      GCCA tttttctttc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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