The detailed information of tRNA gene sequence


Sequence ID>WENV170763513
Genome IDLWDU01011487
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 112
End posion on genome 208
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taaacctatt
tRNA gene sequence 
GGGAATGATTGCGTGGCTGGTGCCCGCTACGGTCTTCAAAACCGTTGTCCCGATATATTA
ATCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaaaagcc
Secondary structure (Cloverleaf model)
>WENV170763513	SeC	TCA
                   t      GCCA tttaaaagcc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        T     TGTCCCGATATATTAATCGGGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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