The detailed information of tRNA gene sequence


Sequence ID>WENV170763534
Genome IDLWDU01011786
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4467
End posion on genome 4381
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCAGTGTGGCGGAATTGGTAGACGCGGCGGATTCAAAATCCGCTTCTTTCACGAGAGTG
TGGGTTCGAGTCCCTCCACTGGTACCA
Downstream region at tRNA end position 
ctttgagtcc
Secondary structure (Cloverleaf model)
>WENV170763534	Leu	CAA
                   n      ACCA ctttgagtcc
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      |   | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTTCACGAGAGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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