The detailed information of tRNA gene sequence


Sequence ID>WENV170763538
Genome IDLWDU01011869
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1119
End posion on genome 1043
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgttccccg
tRNA gene sequence 
CGCGGGATAGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGGAGGTCGATGGTTCAAA
TCCGTCTCCCGCAACCA
Downstream region at tRNA end position 
attttaaccc
Secondary structure (Cloverleaf model)
>WENV170763538	Met	CAT
                   g      ACCA attttaaccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T G C C     A
      T G A        A      | | + | |     A
    C       C G A G       G A T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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