The detailed information of tRNA gene sequence


Sequence ID>WENV170763560
Genome IDLWDU01012410
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1878
End posion on genome 1801
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatagaatat
tRNA gene sequence 
GGTCCTGTAGCTCAGTTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGCCGCCGGTTCGA
GCCCGGTCAGGACCGCCA
Downstream region at tRNA end position 
attttccccg
Secondary structure (Cloverleaf model)
>WENV170763560	Asp	GTC
                   t      GCCA attttccccg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          C G
                    T     T G G C C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C C G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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