The detailed information of tRNA gene sequence


Sequence ID>WENV170763566
Genome IDLWDU01012559
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1332
End posion on genome 1406
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttttatcaa
tRNA gene sequence 
GCTCCTATAGTGTAGTCCGGTTAAGCATTTTGGCTTCTCAAGCCAAAGACTCGGGTTCGA
ATCCCGATGGGAGCAttc
Downstream region at tRNA end position 
gttacttact
Secondary structure (Cloverleaf model)
>WENV170763566	Glu	CTC
                   a      Attc gttacttact
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     G
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A A        T     AGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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