The detailed information of tRNA gene sequence


Sequence ID>WENV170763574
Genome IDLWDU01012698
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4098
End posion on genome 4023
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaatattt
tRNA gene sequence 
AGGCAAGTGGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGTTGGGGGTTCGAGT
CCCTCCTTGCCTGCCA
Downstream region at tRNA end position 
aattaaagga
Secondary structure (Cloverleaf model)
>WENV170763574	Trp	CCA
                   t      GCCA aattaaagga
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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