The detailed information of tRNA gene sequence


Sequence ID>WENV170763587
Genome IDLWDU01013312
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2072
End posion on genome 2161
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttttctttt
tRNA gene sequence 
GGAAAGATGGCAGAGCGGCTGAATGCGCACGCTTGGAAAGCGTGTAAACGGTTAAACGTT
TCGAGGGTTCAAATCCCTCTCTTTCCACCA
Downstream region at tRNA end position 
taaattgcgt
Secondary structure (Cloverleaf model)
>WENV170763587	Ser	GGA
                   t      ACCA taaattgcgt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        G     TAAACGGTTAAACGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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