The detailed information of tRNA gene sequence


Sequence ID>WENV170763588
Genome IDLWDU01013314
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2311
End posion on genome 2237
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagattaat
tRNA gene sequence 
GGACCTCTAGCTCAATTGGTTAGAGCAAACGACTCATAATCGTTAGGTTCACGGTTCAAG
TCCGTGGGGGTCCACtg
Downstream region at tRNA end position 
actttgaata
Secondary structure (Cloverleaf model)
>WENV170763588	Met	CAT
                   t      ACtg actttgaata
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G T G C C     A
      T A A        A      | | | | |     A
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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