The detailed information of tRNA gene sequence


Sequence ID>WENV170763590
Genome IDLWDU01013396
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2454
End posion on genome 2379
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagctcccat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aaatattata
Secondary structure (Cloverleaf model)
>WENV170763590	Trp	CCA
                   t      GCCA aaatattata
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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