The detailed information of tRNA gene sequence


Sequence ID>WENV170763621
Genome IDLWDU01014505
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1194
End posion on genome 1118
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctttaatta
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTGTTGATAACGCGGGGGTCGATGGTTCGAG
TCCATCCAGACCCACCA
Downstream region at tRNA end position 
gatatcgcct
Secondary structure (Cloverleaf model)
>WENV170763621	Ile	GAT
                   a      ACCA gatatcgcct
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C T A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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