The detailed information of tRNA gene sequence


Sequence ID>WENV170763643
Genome IDLWDU01015150
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1727
End posion on genome 1631
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtagtgttgc
tRNA gene sequence 
TGGGGGGTGGCGGAATTGGCAGACGCGCCGCCCTGTCTCGGCGGTGTTGCGTATGTATAT
ACGTGACGTGCAGGTTCAAATCCTGCCTCTCCAGCCT
Downstream region at tRNA end position 
cactccgcga
Secondary structure (Cloverleaf model)
>WENV170763643	Asp	GTC
                   c      GCCT cactccgcga
                     T - A
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C          T A
                    T     C G T C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGTTGCGTATGTATATACGTGACGT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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