The detailed information of tRNA gene sequence


Sequence ID>WENV170763651
Genome IDLWDU01015276
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2079
End posion on genome 2166
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acggtgtttg
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGATTGCACCGGTCTTGAAAACCGGCGTAGGGTCAAACCTA
CCGGGAGTTCGAATCTCCCCCTCTCCGCtt
Downstream region at tRNA end position 
aacagcaagg
Secondary structure (Cloverleaf model)
>WENV170763651	Ser	TGA
                   g      GCtt aacagcaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G       + | | |                 T T
    C       T T G C
      C G A        A     CGTAGGGTCAAACCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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