The detailed information of tRNA gene sequence


Sequence ID>WENV170763711
Genome IDLWDU01017465
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1740
End posion on genome 1652
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgatattat
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTCGAAGGCGCACGCTTGGAAAGTGTGTATACACCACAAGTGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCac
Downstream region at tRNA end position 
gcaattatag
Secondary structure (Cloverleaf model)
>WENV170763711	Ser	GGA
                   t      GCac gcaattatag
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACACCACAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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