The detailed information of tRNA gene sequence


Sequence ID>WENV170763726
Genome IDLWDU01017951
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2258
End posion on genome 2184
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagaaaattt
tRNA gene sequence 
GGGATCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGAGGGTTCGAG
TCCCTTCGGTCCCGCtc
Downstream region at tRNA end position 
tctaaaaccc
Secondary structure (Cloverleaf model)
>WENV170763726	Asp	GTC
                   t      GCtc tctaaaaccc
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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