The detailed information of tRNA gene sequence


Sequence ID>WENV170763727
Genome IDLWDU01017985
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2179
End posion on genome 2266
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagtctgtta
tRNA gene sequence 
GGAGAGCTGGCCGAGTGGCCGAAGGCGCACGCCTGGAAAGTGTGTATACGGTAACGTATC
GAGGGTTCGAATCCCTCGCTCTCCGCCA
Downstream region at tRNA end position 
ctaacnnnnn
Secondary structure (Cloverleaf model)
>WENV170763727	Ser	GGA
                   a      GCCA ctaacnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGTAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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