The detailed information of tRNA gene sequence


Sequence ID>WENV170763737
Genome IDLWDU01018132
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2942
End posion on genome 3036
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taaataattt
tRNA gene sequence 
GGACCGGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAAGGAAGAAATTCCC
GCAAAGGTCGTGGGTTCAAATCCCATCCGGTCCACtn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170763737	Val	CAC
                   t      ACtn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AAGGAAGAAATTCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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