The detailed information of tRNA gene sequence


Sequence ID>WENV170763761
Genome IDLWDU01019081
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1042
End posion on genome 968
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttattgatgc
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTAGGCCTGCAAAGCCTGAAGTCGAGAGTTCAAA
TCTCTCTCTCACCTCtt
Downstream region at tRNA end position 
tgatcttggt
Secondary structure (Cloverleaf model)
>WENV170763761	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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