The detailed information of tRNA gene sequence


Sequence ID>WENV170763765
Genome IDLWDU01019157
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4001
End posion on genome 3917
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnnnnttgt
tRNA gene sequence 
GGGCGAGTGGCGGAATTGGTAGACGCGTTGGTCTTAGGAACCAATAGTGCAAGCTGTGAA
GGTTCGAGTCCTTTCTCGCCTACCA
Downstream region at tRNA end position 
ttaaaaaatt
Secondary structure (Cloverleaf model)
>WENV170763765	Leu	TAG
                   t      ACCA ttaaaaaatt
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGTGCAAGCTGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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