The detailed information of tRNA gene sequence


Sequence ID>WENV170763780
Genome IDLWDU01019715
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 596
End posion on genome 685
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttcttct
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTATAGGGTTTATCCCC
TATCGAGGGTTCAAATCCCTCACTCTCCGCnn
Downstream region at tRNA end position 
nnnnnngctg
Secondary structure (Cloverleaf model)
>WENV170763780	Ser	GCT
                   t      GCnn nnnnnngctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATCCCCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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