The detailed information of tRNA gene sequence


Sequence ID>WENV170763804
Genome IDLWDU01020687
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1911
End posion on genome 1835
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atttttcatt
tRNA gene sequence 
GGGCCGGTCGTTCAGCCTGGTAGGATGCGCCCATGGCATGGGTGAGGTCAAGGGTTCAAA
TCCCTTCCGGTCCACCA
Downstream region at tRNA end position 
ttatgaattt
Secondary structure (Cloverleaf model)
>WENV170763804	Ala	GGC
                   t      ACCA ttatgaattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        C      | | | | |     A
    C       C T T G       A A G G G     C
    T       | + | +                 T T
    G       G G A T
      G T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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