The detailed information of tRNA gene sequence


Sequence ID>WENV170763822
Genome IDLWDU01021555
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1169
End posion on genome 1094
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaatcttgT
tRNA gene sequence 
GGGTTCGTAGCCTAGCCTGGTAGGGCGATGGTCTCCAAAACCATCGATCGTCGGTTCAAA
TCCGATCGGGCCCATtt
Downstream region at tRNA end position 
tttattttat
Secondary structure (Cloverleaf model)
>WENV170763822	Trp	CCA
                   T      ATtt tttattttat
                     G - C
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      + | | | |     A
    C       T C C G       G T C G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     CGATC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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