The detailed information of tRNA gene sequence


Sequence ID>WENV170763823
Genome IDLWDU01021681
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2499
End posion on genome 2574
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acggttttat
tRNA gene sequence 
GCTCCTGTAGTGTAGTCCGGTCAAGCATTTAGGCCTTTCACGCCTGAGACTCGGGTTCGA
ATCCCGACGGGAGCACtt
Downstream region at tRNA end position 
tggaaagaaa
Secondary structure (Cloverleaf model)
>WENV170763823	Glu	TTC
                   t      ACtt tggaaagaaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     G
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    T C A A        T     AGAC
                    T + G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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