The detailed information of tRNA gene sequence


Sequence ID>WENV170763848
Genome IDLWDU01022537
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1857
End posion on genome 1932
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagctaaatT
tRNA gene sequence 
GGCGAGGTAGCTCAGTATGGCAGAGCGTCCGTTTCATGAGCGGAAAGTCGGGGGTTCAAA
TCCCCCTCTCGCCATta
Downstream region at tRNA end position 
tgtttttata
Secondary structure (Cloverleaf model)
>WENV170763848	Met	CAT
                   T      ATta tgtttttata
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    A       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AAGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  T       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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