The detailed information of tRNA gene sequence


Sequence ID>WENV170763872
Genome IDLWDU01023284
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1720
End posion on genome 1649
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttatttgttg
tRNA gene sequence 
GTAAATATAGTTTTAATGGTAAAACAGCAGTCTTCAAAATTGCCAATCAAGGTTCGAATC
CCTGTGTTTACGgga
Downstream region at tRNA end position 
tatctgcatt
Secondary structure (Cloverleaf model)
>WENV170763872	SeC	TCA
                   g      Ggga tatctgcatt
                     G - C
                     T - A
                     A - T
                     A - T
                     A - T
                     T + G
                     A - T          T A
                    T     G T C C C     A
      A A T        A      | |   | |     G
    T       T T T G       C A A G G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     CAAT
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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