The detailed information of tRNA gene sequence


Sequence ID>WENV170763876
Genome IDLWDU01023526
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1067
End posion on genome 993
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttccacctt
tRNA gene sequence 
GCCCCTGTAGTTCAATGGATAGAATAAATCCCTCCTAAGGATTAGATACTGGTTCGACTC
CAGTCGGGGGTACAA
Downstream region at tRNA end position 
caattggaga
Secondary structure (Cloverleaf model)
>WENV170763876	Arg	CCT
                   t      ACAA caattggaga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T C
                    T     T G A C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C T G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    A - T
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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