The detailed information of tRNA gene sequence


Sequence ID>WENV170763879
Genome IDLWDU01023579
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2421
End posion on genome 2332
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGAAAGCGGCGGTCTTGAAAACCGTTGAGGGTTTATCCCCT
CCCAGGGTTCGAATCCCTGCTTCTCCGCCA
Downstream region at tRNA end position 
tgaaacgata
Secondary structure (Cloverleaf model)
>WENV170763879	Ser	TGA
                   n      GCCA tgaaacgata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGAGGGTTTATCCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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