The detailed information of tRNA gene sequence


Sequence ID>WENV170763913
Genome IDLWDU01024493
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1663
End posion on genome 1587
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccacagatt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCGTCTCGTTCGGGACGAGAAGGTCGCTGGTTCGAT
TCCAGTCTCCCCGACCA
Downstream region at tRNA end position 
aatccttttt
Secondary structure (Cloverleaf model)
>WENV170763913	Pro	CGG
                   t      ACCA aatccttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T T
                    T     T G A C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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