The detailed information of tRNA gene sequence


Sequence ID>WENV170763929
Genome IDLWDU01024810
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2983
End posion on genome 3059
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catccacatc
tRNA gene sequence 
GGCTCCTTAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCCGGTGTCCCCAGTTCGAG
TCTGGGAGGAGCCACCA
Downstream region at tRNA end position 
aaataccaat
Secondary structure (Cloverleaf model)
>WENV170763929	Met	CAT
                   c      ACCA aaataccaat
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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