The detailed information of tRNA gene sequence


Sequence ID>WENV170763940
Genome IDLWDU01025257
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 701
End posion on genome 776
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaccctgagt
tRNA gene sequence 
AGGGCGGTAGTTCAATTGGTAGAGCAACGGTCTCCAAAACCGTCTGTTGGGGGTTCGAAT
CCCTCCCGCCCTGCCA
Downstream region at tRNA end position 
ngtggtcgaa
Secondary structure (Cloverleaf model)
>WENV170763940	Trp	CCA
                   t      GCCA ngtggtcgaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     CTGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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